-------------------------------------------------------------------------------
The complete contents of the MEME/MAST tarfile is listed below.
Following the directory listing, the names of the files which are
included in the licenses for MEME and MAST are specified.  All other
files are provided for informational and/or debugging
purposes only and are not part of the license.
-------------------------------------------------------------------------------

-------------------------------------------------------------------------------
BEGIN TARFILE DIRECTORY LISTING
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meme.2.2.com/README

meme.2.2.com/bin:
install 	make_logodds 	organize 
machid 		mast2html 	runtests 

meme.2.2.com/doc:
bkg.jpg				meme-adv.html 		meme-input.html
intro.html			meme-intro.html
mast-databases.html		meme-output-example.html
mast-input.html			meme-output.html
mast-intro.html			meme.html
mast-output-example.html	motif-format.html
mast-output.html		release_notes.html
mast.html

meme.2.2.com/doc/help:
help_alphabet.html      help_distribution.html  help_format.html

meme.2.2.com/src:
gamma.c		logs.c		motifs.c	regress.c
align.c		general.csh	makefile	mp.c		seq2theta.c
banner.c	getsize.c	mast.c		normalize.c	shorten.c
chi.c		hash.c		mast.csh	oops.c		split.c
clock.c		hash_alph.c	meme.c		palindrome.c	starts.c
diagram.c	init.c		meme.csh	prior.c		subseq7.c
diagram.y	justlike.c	meme.doc	prior1.plib	tcm.c
display.c	likelihood.c	meme_util.c	prior30.plib	zoops.c
em.c		logodds.c	message.c	read_seq_file.c

meme.2.2.com/src/INCLUDE:
align.h         em.h            logodds.h       mp.h            split.h
banner.h        gamma.h         logs.h          mtype.h         user.h
chi.h           general.h       macros.h        prior.h
clock.h         hash.h          mast.h          projrel.h
diagram.h       hash_alph.h     meme.h          read_seq_file.h
display.h       histogram.h     motifs.h        regress.h


meme.2.2.com/tests:
adh.oops.crp0.mast	crp0.oops.meme		farntrans5.zoops.mast
adh.oops.mast		crp0.s			farntrans5.zoops.meme
adh.oops.meme		crp0.tcm.mast		lipocalin.oops.mast
adh.s			crp0.tcm.meme		lipocalin.oops.meme
adh.tcm.crp0.mast	crp0.zoops.mast		lipocalin.s
adh.tcm.mast		crp0.zoops.meme		lipocalin.tcm.mast
adh.tcm.meme		farntrans5.oops.mast	lipocalin.tcm.meme
adh.zoops.crp0.mast	farntrans5.oops.meme	lipocalin.zoops.mast
adh.zoops.mast		farntrans5.s		lipocalin.zoops.meme
adh.zoops.meme		farntrans5.tcm.mast
crp0.oops.mast		farntrans5.tcm.meme
-------------------------------------------------------------------------------
END TARFILE DIRECTORY LISTING
-------------------------------------------------------------------------------


-------------------------------------------------------------------------------
Included in MEME license:

meme.2.2.com/src:
align.c		banner.c	chi.c		display.c	em.c	
gamma.c		init.c		justlike.c	likelihood.c	logs.c	
meme.c		meme.csh	meme.doc	meme_util.c	message.c
mp.c		normalize.c	oops.c		palindrome.c	prior.c	
prior1.plib	prior30.plib	seq2theta.c 	shorten.c 	split.c
starts.c 	subseq7.c 	tcm.c 		zoops.c

meme.2.2.com/src/INCLUDE:
align.h 	banner.h 	chi.h 		em.h 		gamma.h
logs.h 		meme.h 		mp.h 		prior.h		 split.h
-------------------------------------------------------------------------------

-------------------------------------------------------------------------------
Included in MAST license:

meme.2.2.com/bin:
make_logodds mast2html

meme.2.2.com/src:
diagram.c	diagram.y	logodds.c	mast.c		mast.csh
motifs.c	regress.c

meme.2.2.com/src/INCLUDE:
diagram.h 	display.h	 logodds.h 	mast.h 		motifs.h
regress.h
-------------------------------------------------------------------------------

-------------------------------------------------------------------------------
Included in both MEME and MAST licenses:

meme.2.2.com/bin:
install 	machid 	

meme.2.2.com/src:
clock.c		hash.c		hash_alph.c	makefile	read_seq_file.c
getsize.c	general.csh	

meme.2.2.com/src/INCLUDE:
clock.h 	general.h 	hash.h 		hash_alph.h 	histogram.h
macros.h 	mtype.h 	projrel.h 	read_seq_file.h user.h
-------------------------------------------------------------------------------