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Version 4.9.1

Use this form to submit DNA or protein sequences to MEME. MEME will analyze your sequences for similarities among them and produce a description (motif) for each pattern it discovers.

Data Submission Form
Your e-mail address:

Re-enter e-mail address:



Please enter the sequences which you believe share one or more
motifs. The sequences may contain no more than 60000 characters
total total in any of a large number of formats.

Enter the name of a file containing the sequences here:

or
the actual sequences here (Sample Protein Input Sequences):
How do you think the occurrences of a single motif are distributed among the sequences?
One per sequence
Zero or one per sequence
Any number of repetitions


MEME will find the optimum width of each motif within the limits you specify here:
Minimum width (>= 2)
Maximum width (<= 300)

Maximum number of motifs to find
Description of your sequences:


MEME will find the optimum number of sites for each motif within the limits you specify here:
Minimum sites (>= 2)
Maximum sites (<= 600)

Shuffle sequence letters
Perform discriminative motif discovery – Enter the name of a file containing ‘negative sequences:


Enter the name of a file containing a background Markov model:

DNA-ONLY OPTIONS
(Ignored for protein searches)

Search given strand only
Look for palindromes only