meme2meme

Usage:

meme2meme [options] [<meme motif file>]+

Description

Convert and merge multiple MEME formatted files into a single minimal meme format file.

Input

MEME Motif File

A motif file in one of the formats output by MEME. The MEME HTML format for versions < 4.4.0 is not supported.

Output

Options

Option Parameter Description Default Behaviour
Input/Output
-consensus Numeric names are swapped for an IUPAC consensus. The original names are used.
-forceurl MEME motifs may already have URLs embedded but this option causes them to be replaced by the URL passed to -url. Existing URLs are kept.